T2N is an extension of the TREES toolbox
providing an interface between Matlab and compartmental modeling environment
[download zipped T2N with documentation]
[download zipped TREES (slightly modified for use with T2N)]
[download zipped T2N granule cell model]
[readme for T2N granule cell model]
- Full TREES functionality to position mechanisms in NEURON
and to readout states as a function of morphology.
- Distribute NEURON simulations on multiple cores.
- Generate compartmental models that are stable
over a broad range of reconstructed as well asand synthetic morphologies.
"Beining M, Mongiat LA, Schwarzacher SW, Cuntz H, Jedlicka P (2017).
T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells.